Extra diol.
Rest, 4GHG

select All;
wireframe off;
spacefill off;
select FE2 and *A;
spacefill on;
spacefill 300;
color orange;
select within(group,within(3.0,iron)) and *A;
wireframe 70;
color carbon [200,200,200];
center atomno=11882;
background white;
select iron or within(2.8,iron);
wireframe off;
select water and within(2.8,iron) and *a;
spacefill 200;
antialiasdisplay=true;



substrate, 4GHG
select All;
wireframe off;
spacefill off;
select FE2 and *c;
spacefill on;
spacefill 300;
color orange;
select within(group,within(3.0,iron)) and *c;
wireframe 70;
color carbon [200,200,200];
center atomno=11957;;
background white;
select iron or within(2.8,iron);
wireframe off;
select water and within(2.8,iron) and *c;
spacefill 200;
antialiasdisplay=true;


superoxide semiquinone, 2IGA:C

select All;
wireframe off;
spacefill off;
select FE2 and *c;
spacefill on;
spacefill 300;
color orange;
select within(group,within(3.0,iron)) and *c;
wireframe 70;
color carbon [200,200,200];
center atomno=11830;
background white;
select iron or within(2.8,iron);
wireframe off;
select water and within(2.8,iron) and *c;
spacefill 200;
select oxy;
spacefill 150;
wireframe 70;
antialiasdisplay=true;


peroxy bridge, 2IGA:D

select All;
wireframe off;
spacefill off;
select FE2 and *d;
spacefill on;
spacefill 300;
color orange;
select within(group,within(3.0,iron)) and *d;
wireframe 70;
color carbon [200,200,200];
select xx3;
wireframe 70;
color carbon [200,200,200];
center atomno=11863;
background white;
select iron or within(2.8,iron);
wireframe off;
select water and within(2.8,iron) and *d;
spacefill 200;
antialiasdisplay=true;
;

select xx3;
wireframe 70;



product: 2IGA:A

select All;
wireframe off;
spacefill off;
select FE2 and *a;
spacefill on;
spacefill 300;
color orange;
select within(group,within(3.0,iron)) and *a;
wireframe 70;
color carbon [200,200,200];
select xxp;
wireframe 70;
color carbon [200,200,200];
center atomno=11751;
background white;
select iron or within(2.8,iron);
wireframe off;
select water and within(2.8,iron) and *a;
spacefill 200;
antialiasdisplay=true;



Intradiol.

1EOB: wildtype with PCD bound
select all
wireframe off
spacefill off
cartoons off
select iron
spacefill 300
select within(group,within(2.8,iron))
wireframe 70
color cpk
color carbon [200,200,200]
select iron or within(2.8,iron)
wireframe off
select 447
wireframe 70
color cpk
color carbon [200,200,200]
center atomno=3529
select iron
color orange
background white
select DHB
wireframe 70

4WHP: rest
select all
wireframe off
spacefill off
cartoons off
select iron and *B
spacefill 300
select within(group,within(2.8,iron)) and *B
wireframe 70
color cpk
color carbon [200,200,200]
select iron or within(2.8,iron)
wireframe off
select water and within(2.8,iron) and *B
spacefill 150
color cpk
center atomno=10456
select iron
color orange
background white

4WHQ: alkylperoxo
select all
wireframe off
spacefill off
cartoons off
select iron and *B
spacefill 300
select within(group,within(2.8,iron)) and *B
wireframe 70
color cpk
color carbon [200,200,200]
select iron or within(2.8,iron)
wireframe off
select 447 and *B.??%B
wireframe off
select 447 and *B.???%B
wireframe off
select 612 and *B
wireframe 70
color cpk
center atomno=10567
select iron
color orange
background white

4WHR: anhydride
select all
wireframe off
spacefill off
cartoons off
select iron and *B
spacefill 300
select within(group,within(2.8,iron)) and *B
wireframe 70
color cpk
color carbon [200,200,200]
select iron or within(2.8,iron)
wireframe off
select 607 and *B
wireframe 70
select water and within(2.8,iron) and *B
spacefill 150
color cpk
center atomno=10507
select iron
color orange
background white